EnhancerDB
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  3. rs10460500[chr2:240213127]
Enhancers that have rs10460500[chr2:240213127]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 240159334 240219661 enh6224
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs10460500[chr2:240213127]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 240213115 240213130 ZIC4 JASPAR yes 82226839
chr2 240213116 240213130 GLIS2 JASPAR yes 82226840
chr2 240213116 240213130 GLIS3 JASPAR yes 82226841
chr2 240213123 240213137 PLAG1 JASPAR yes 82226844
chr2 240213123 240213138 TFAP2A JASPAR yes 82226845
chr2 240213123 240213138 TFAP2C JASPAR yes 82226846
chr2 240213124 240213129 SP1 TRANSFAC yes 82226847
chr2 240213125 240213140 TFAP2A JASPAR yes 82226848
chr2 240213125 240213140 TFAP2C JASPAR yes 82226849
chr2 240213126 240213138 TFAP2A JASPAR yes 82226850
chr2 240213126 240213138 TFAP2B JASPAR yes 82226851
chr2 240213126 240213138 TFAP2C JASPAR yes 82226852
Genes associated with rs10460500[chr2:240213127], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More