EnhancerDB
  1. Home
  2. SNP
  3. rs10462558[chr5:77806988]
Enhancers that have rs10462558[chr5:77806988]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 77784972 77817655 enh8511
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs10462558[chr5:77806988]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 77806984 77806988 YY1 TRANSFAC yes 63594653
chr5 77806984 77806995 HOXC11 JASPAR yes 63594654
chr5 77806985 77806995 EMX1 JASPAR yes 63594655
chr5 77806985 77806995 MEOX2 JASPAR yes 63594656
chr5 77806986 77806994 NKX6-1 JASPAR yes 63594657
Genes associated with rs10462558[chr5:77806988], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More