EnhancerDB
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  3. rs10468571[chr17:48959458]
Enhancers that have rs10468571[chr17:48959458]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 48954425 48973436 enh32228
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1)
Transcript factors that have rs10468571[chr17:48959458]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 48959437 48959458 IRF1 JASPAR yes 54728360
chr17 48959441 48959462 IRF1 JASPAR yes 54728362
chr17 48959443 48959458 IRF9 JASPAR yes 54728364
chr17 48959444 48959458 IRF7 JASPAR yes 54728365
chr17 48959444 48959458 IRF8 JASPAR yes 54728366
chr17 48959445 48959459 SPIC JASPAR yes 54728367
chr17 48959445 48959459 STAT1 JASPAR yes 54728368
chr17 48959445 48959460 PRDM1 JASPAR yes 54728369
chr17 48959445 48959460 STAT2 JASPAR yes 54728370
chr17 48959445 48959466 IRF1 JASPAR yes 54728371
chr17 48959449 48959464 PRDM1 JASPAR yes 54728372
Genes associated with rs10468571[chr17:48959458], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More