EnhancerDB
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  3. rs10483820[chr14:69138371]
Enhancers that have rs10483820[chr14:69138371]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr14 69119325 69164775 enh3300
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs10483820[chr14:69138371]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr14 69138359 69138377 IRF2 JASPAR yes 116244795
chr14 69138363 69138379 POU4F3 JASPAR yes 116244796
chr14 69138365 69138376 HOXA10 JASPAR yes 116244797
chr14 69138365 69138379 POU4F1 JASPAR yes 116244798
chr14 69138365 69138380 HNF1A JASPAR yes 116244799
chr14 69138366 69138376 GSX2 JASPAR yes 116244800
chr14 69138366 69138376 HOXB2 JASPAR yes 116244801
chr14 69138366 69138376 HOXB3 JASPAR yes 116244802
chr14 69138366 69138376 MNX1 JASPAR yes 116244803
chr14 69138366 69138376 POU6F1 JASPAR yes 116244804
chr14 69138366 69138378 HNF1B JASPAR yes 116244805
chr14 69138366 69138379 HNF1B JASPAR yes 116244806
chr14 69138367 69138375 LMX1A JASPAR yes 116244807
chr14 69138367 69138375 LMX1B JASPAR yes 116244808
chr14 69138367 69138375 NKX6-1 JASPAR yes 116244809
chr14 69138367 69138375 NKX6-2 JASPAR yes 116244810
chr14 69138367 69138375 VAX1 JASPAR yes 116244811
chr14 69138367 69138375 VAX2 JASPAR yes 116244812
chr14 69138367 69138375 VSX1 JASPAR yes 116244813
chr14 69138367 69138375 VSX2 JASPAR yes 116244814
Genes associated with rs10483820[chr14:69138371], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More