EnhancerDB
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  3. rs10518743[chr15:42229852]
Enhancers that have rs10518743[chr15:42229852]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 42202285 42235244 enh3549
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs10518743[chr15:42229852]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 42228828 42230099 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21651351
chr15 42228828 42230099 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108135311
chr15 42229846 42229860 GATA2 JASPAR yes 23007551
chr15 42229850 42229858 GATA3 JASPAR yes 23007552
chr15 42229850 42229858 GATA5 JASPAR yes 23007553
Genes associated with rs10518743[chr15:42229852], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr15 42190950 42264776 - EHD4 ENSG00000103966.5 42264776 0 Stomach 0.14883 13847