EnhancerDB
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  3. rs10539206[chr5:79550048]
Enhancers that have rs10539206[chr5:79550048]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 79539202 79550375 enh8515
Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673)
Transcript factors that have rs10539206[chr5:79550048]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 79550038 79550053 FOXA1 JASPAR yes 63713509
chr5 79550041 79550055 STAT1 JASPAR yes 63713510
chr5 79550042 79550053 FOXA1 JASPAR yes 63713511
chr5 79550043 79550064 IRF1 JASPAR yes 63713512
Genes associated with rs10539206[chr5:79550048], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More