EnhancerDB
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  3. rs10547909[chr12:125258087]
Enhancers that have rs10547909[chr12:125258087]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 125176905 125261395 enh2676
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs10547909[chr12:125258087]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 125257975 125258178 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21583044
chr12 125258075 125258089 EBF1 JASPAR yes 124420566
chr12 125258086 125258106 RREB1 JASPAR yes 124420567
Genes associated with rs10547909[chr12:125258087], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More