EnhancerDB
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  3. rs10548483[chr12:122855517]
Enhancers that have rs10548483[chr12:122855517]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 122849366 122861555 enh15067
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Stomach Muscle (A673) Placenta Adrenal Uterus Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs10548483[chr12:122855517]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 122855501 122855522 IRF1 JASPAR yes 124272144
chr12 122855502 122855517 FOXP1 JASPAR yes 124272145
chr12 122855504 122855519 FOXP1 JASPAR yes 124272146
chr12 122855505 122855526 IRF1 JASPAR yes 124272147
chr12 122855506 122855521 FOXP1 JASPAR yes 124272148
chr12 122855506 122855527 IRF1 JASPAR yes 124272149
chr12 122855507 122855528 IRF1 JASPAR yes 124272150
chr12 122855511 122855526 FOXP1 JASPAR yes 124272151
chr12 122855511 122855532 IRF1 JASPAR yes 124272152
chr12 122855512 122855527 FOXP1 JASPAR yes 124272153
chr12 122855512 122855533 IRF1 JASPAR yes 124272154
chr12 122855513 122855528 FOXP1 JASPAR yes 124272155
chr12 122855514 122855529 FOXP1 JASPAR yes 124272156
chr12 122855515 122855530 FOXP1 JASPAR yes 124272157
chr12 122855516 122855531 FOXP1 JASPAR yes 124272158
Genes associated with rs10548483[chr12:122855517], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More