EnhancerDB
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  3. rs10554239[chr3:149275789]
Enhancers that have rs10554239[chr3:149275789]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 149269565 149284575 enh21021
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Muscle (A673) Placenta Colon (HCT116) Breast Uterus Lung (PC-9) Pancreas Pancreas (Panc1) Neural Stem Cells (H9) Stomach
Transcript factors that have rs10554239[chr3:149275789]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 149275786 149275801 FOXP1 JASPAR yes 6505008
chr3 149275787 149275802 FOXP1 JASPAR yes 6505009
chr3 149275788 149275803 FOXP1 JASPAR yes 6505010
chr3 149275788 149275809 IRF1 JASPAR yes 6505011
chr3 149275789 149275804 FOXP1 JASPAR yes 6505012
chr3 149275789 149275810 IRF1 JASPAR yes 6505013
Genes associated with rs10554239[chr3:149275789], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More