EnhancerDB
  1. Home
  2. SNP
  3. rs10628060[chr6:30808183]
Enhancers that have rs10628060[chr6:30808183]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 30740965 30818275 enh23149
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs10628060[chr6:30808183]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 30808177 30808183 MYC TRANSFAC yes 101057963
chr6 30808180 30808195 FOXP1 JASPAR yes 101057964
chr6 30808181 30808196 FOXP1 JASPAR yes 101057965
chr6 30808182 30808188 TBP TRANSFAC yes 101057966
chr6 30808182 30808197 FOXP1 JASPAR yes 101057967
chr6 30808182 30808203 IRF1 JASPAR yes 101057968
chr6 30808183 30808198 FOXP1 JASPAR yes 101057969
chr6 30808183 30808204 IRF1 JASPAR yes 101057970
Genes associated with rs10628060[chr6:30808183], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More