EnhancerDB
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  3. rs10655409[chr14:61573678]
Enhancers that have rs10655409[chr14:61573678]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr14 61563565 61582555 enh3250
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Stomach Skin (Keratinocyte) Bone (Osteoblast) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs10655409[chr14:61573678]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr14 61573119 61574722 ZNF274 GTRD no Cervix (HeLa-S3) 21621902
chr14 61573166 61574904 ZNF274 GTRD no Cervix (HeLa-S3) 21621903
chr14 61573438 61574693 ZNF274 GTRD no Cervix (HeLa-S3) 21621904
chr14 61573542 61573832 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21621905
chr14 61573548 61573818 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21621906
chr14 61573562 61573822 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21621907
chr14 61573573 61573803 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21621908
chr14 61573593 61573817 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21621909
chr14 61573600 61573850 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21621910
chr14 61573663 61574654 ZNF274 GTRD no Cervix (HeLa-S3) 21621911
chr14 61573671 61573679 BARX1 JASPAR yes 115816568
chr14 61573671 61573679 BSX JASPAR yes 115816569
chr14 61573671 61573679 ISL2 JASPAR yes 115816570
chr14 61573671 61573679 LMX1B JASPAR yes 115816571
chr14 61573671 61573679 MSX1 JASPAR yes 115816572
chr14 61573671 61573679 MSX2 JASPAR yes 115816573
chr14 61573678 61573697 CTCF JASPAR yes 115816574
Genes associated with rs10655409[chr14:61573678], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More