EnhancerDB
  1. Home
  2. SNP
  3. rs1078468[chr2:38680053]
Enhancers that have rs1078468[chr2:38680053]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 38653105 38683515 enh33236
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Stomach Colon (HCT116) Breast Uterus Thyroid Lung (PC-9) Pancreas Muscle (Myotube) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs1078468[chr2:38680053]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 38680049 38680064 FOXP1 JASPAR yes 73142769
chr2 38680049 38680070 IRF1 JASPAR yes 73142770
chr2 38680050 38680065 FOXP1 JASPAR yes 73142771
chr2 38680050 38680071 IRF1 JASPAR yes 73142772
chr2 38680051 38680066 FOXP1 JASPAR yes 73142773
chr2 38680051 38680072 IRF1 JASPAR yes 73142774
chr2 38680052 38680067 FOXP1 JASPAR yes 73142775
chr2 38680052 38680073 IRF1 JASPAR yes 73142776
chr2 38680053 38680068 FOXP1 JASPAR yes 73142777
Genes associated with rs1078468[chr2:38680053], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More