EnhancerDB
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  3. rs1079530[chr17:2772652]
Enhancers that have rs1079530[chr17:2772652]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 2744850 2808324 enh4213
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Neural Stem Cells (H9) Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs1079530[chr17:2772652]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 2772647 2772660 HSF1 JASPAR yes 52779852
chr17 2772647 2772660 HSF2 JASPAR yes 52779853
chr17 2772647 2772660 HSF4 JASPAR yes 52779854
chr17 2772651 2772662 STAT3 JASPAR yes 52779855
Genes associated with rs1079530[chr17:2772652], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More