EnhancerDB
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  3. rs10799809[chr1:19727062]
Enhancers that have rs10799809[chr1:19727062]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 19711685 19745775 enh98
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Neural Stem Cells (H9) Thymus Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs10799809[chr1:19727062]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 19727048 19727066 SRF JASPAR yes 27185555
chr1 19727058 19727070 HES5 JASPAR yes 27185556
chr1 19727058 19727070 HES7 JASPAR yes 27185557
chr1 19727059 19727069 BHLHE40 JASPAR yes 27185558
chr1 19727059 19727069 HEY1 JASPAR yes 27185559
chr1 19727059 19727069 HEY2 JASPAR yes 27185560
chr1 19727059 19727069 MAX JASPAR yes 27185561
chr1 19727059 19727069 MNT JASPAR yes 27185562
chr1 19727059 19727069 TFE3 JASPAR yes 27185563
chr1 19727059 19727069 TFEB JASPAR yes 27185564
chr1 19727061 19727066 MYC TRANSFAC yes 27185565
chr1 19727061 19727066 USF1 TRANSFAC yes 27185566
chr1 19727061 19727066 USF2 TRANSFAC yes 27185567
chr1 19727061 19727068 USF1 JASPAR yes 27185568
Genes associated with rs10799809[chr1:19727062], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More