EnhancerDB
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  3. rs10852644[chr16:4346399]
Enhancers that have rs10852644[chr16:4346399]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 4330820 4352135 enh16514
Astrocyte Colon (HCT116) Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs10852644[chr16:4346399]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 4342895 4346581 ZBTB33 GTRD no Lung (A549) 108176172
chr16 4343227 4348676 ZNF143 GTRD no Epithelial (MCF-7) 21686440
chr16 4343227 4348676 ZNF143 GTRD no Epithelial (MCF-7) 108176173
chr16 4344675 4346727 ZNF274 GTRD no Liver (HepG2) 21686462
chr16 4344697 4346457 ZNF274 GTRD no Liver (HepG2) 21686463
chr16 4344713 4346836 ZNF274 GTRD no Liver (HepG2) 21686465
chr16 4344751 4346692 ZNF274 GTRD no Liver (HepG2) 21686466
chr16 4344767 4346399 ZNF274 GTRD no Liver (HepG2) 21686467
chr16 4344777 4346785 ZNF274 GTRD no Liver (HepG2) 21686470
chr16 4344783 4346577 ZNF143 GTRD no Epithelial (MCF-7) 21686471
chr16 4344797 4346752 ZNF274 GTRD no Liver (HepG2) 21686472
chr16 4344813 4346441 ZNF274 GTRD no Liver (HepG2) 21686473
chr16 4344823 4346533 ZNF143 GTRD no Epithelial (MCF-7) 21686475
chr16 4344854 4346761 ZNF274 GTRD no Liver (HepG2) 21686476
chr16 4344859 4346406 ZNF274 GTRD no Liver (HepG2) 21686477
chr16 4344862 4346661 ZNF274 GTRD no Liver (HepG2) 21686478
chr16 4344877 4346578 ZNF274 GTRD no Liver (HepG2) 21686479
chr16 4344925 4346504 ZNF143 GTRD no Epithelial (MCF-7) 21686480
chr16 4344926 4346700 ZNF274 GTRD no Liver (HepG2) 21686481
chr16 4345611 4346553 ZNF274 GTRD no Liver (HepG2) 21686493
chr16 4345612 4346421 ZNF274 GTRD no Liver (HepG2) 21686494
chr16 4345656 4346400 ZNF274 GTRD no Liver (HepG2) 21686500
chr16 4345674 4346767 ZNF274 GTRD no Liver (HepG2) 21686504
chr16 4345675 4346699 ZNF274 GTRD no Liver (HepG2) 21686505
chr16 4345689 4346599 ZNF274 GTRD no Liver (HepG2) 21686508
chr16 4345741 4346740 ZNF274 GTRD no Liver (HepG2) 21686515
chr16 4345741 4346817 ZNF274 GTRD no Liver (HepG2) 21686516
chr16 4345763 4346503 ZNF274 GTRD no Liver (HepG2) 21686518
chr16 4345842 4346642 ZNF274 GTRD no Liver (HepG2) 21686525
chr16 4346225 4346842 ZNF274 GTRD no Cervix (HeLa-S3) 21686528
chr16 4346392 4346413 IRF1 JASPAR yes 9268017
chr16 4346399 4346420 IRF1 JASPAR yes 9268018
Genes associated with rs10852644[chr16:4346399], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More