EnhancerDB
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  3. rs10880936[chr12:46608562]
Enhancers that have rs10880936[chr12:46608562]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 46599536 46618695 enh2312
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Blood (OCI-LY7) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (A673) Heart
chr12 46608402 46609191 vista13214
VISTA
Transcript factors that have rs10880936[chr12:46608562]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 46608203 46609441 ZBTB33 GTRD no Brain (SK-N-SH) 108026929
chr12 46608234 46609458 ZBTB33 GTRD no Brain (SK-N-SH) 108026930
chr12 46608249 46609100 ZBTB33 GTRD no Brain (SK-N-SH) 108026931
chr12 46608271 46609345 ZBTB33 GTRD no Brain (SK-N-SH) 108026932
chr12 46608286 46610116 ZNF274 GTRD no Bone Marrow (K562) 21541050
chr12 46608286 46610116 ZNF274 GTRD no Bone Marrow (K562) 108026933
chr12 46608286 46610116 ZNF274 GTRD no Bone Marrow (K562) 108026934
chr12 46608300 46609001 TEF1 GTRD no Bone (Osteoblast) 108026935
chr12 46608334 46609114 ZBTB33 GTRD no Brain (SK-N-SH) 108026936
chr12 46608358 46608879 ZBTB33 GTRD no Brain (SK-N-SH) 108026937
chr12 46608363 46609077 ZBTB33 GTRD no Brain (SK-N-SH) 108026938
chr12 46608399 46608902 ZBTB33 GTRD no Brain (SK-N-SH) 108026939
chr12 46608403 46608944 ZBTB33 GTRD no Brain (SK-N-SH) 108026940
chr12 46608428 46609237 ZBTB33 GTRD no Brain (SK-N-SH) 108026941
chr12 46608436 46608942 ZBTB33 GTRD no Brain (SK-N-SH) 108026942
chr12 46608438 46608942 ZBTB33 GTRD no Brain (SK-N-SH) 108026943
chr12 46608450 46608930 ZBTB33 GTRD no Brain (SK-N-SH) 108026944
chr12 46608482 46608772 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21541051
chr12 46608482 46608772 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108026945
chr12 46608502 46608798 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21541052
chr12 46608502 46608798 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108026946
chr12 46608555 46608565 TFEB JASPAR yes 82394304
chr12 46608555 46608565 TFEC JASPAR yes 82394305
chr12 46608555 46608565 TFEB JASPAR yes 120604158
chr12 46608555 46608565 TFEC JASPAR yes 120604159
Genes associated with rs10880936[chr12:46608562], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More