EnhancerDB
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  3. rs10888845[chr1:54771308]
Enhancers that have rs10888845[chr1:54771308]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 54761072 54782679 enh11866
Liver (HepG2) Brain (SK-N-SH) Large Intestine Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Stomach Placenta Thyroid Uterus Embryonic Stem Cell Line (H1-hESC) Pancreas Spleen Muscle (Myotube) Neural Stem Cells (H9) Thymus Heart
chr1 54771290 54771540 vista1648
VISTA
Transcript factors that have rs10888845[chr1:54771308]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 54771292 54771313 IRF1 JASPAR yes 28971169
chr1 54771292 54771313 IRF1 JASPAR yes 118292413
chr1 54771293 54771308 FOXP1 JASPAR yes 28971170
chr1 54771293 54771308 FOXP1 JASPAR yes 118292414
chr1 54771294 54771315 IRF1 JASPAR yes 28971171
chr1 54771294 54771315 IRF1 JASPAR yes 118292415
chr1 54771295 54771310 FOXP1 JASPAR yes 28971172
chr1 54771295 54771310 FOXP1 JASPAR yes 118292416
chr1 54771296 54771311 STAT2 JASPAR yes 28971173
chr1 54771296 54771311 STAT2 JASPAR yes 118292417
chr1 54771296 54771317 IRF1 JASPAR yes 28971174
chr1 54771296 54771317 IRF1 JASPAR yes 118292418
chr1 54771297 54771312 FOXP1 JASPAR yes 28971175
chr1 54771297 54771312 FOXP1 JASPAR yes 118292419
chr1 54771298 54771319 IRF1 JASPAR yes 28971176
chr1 54771298 54771319 IRF1 JASPAR yes 118292420
chr1 54771302 54771317 PRDM1 JASPAR yes 28971177
chr1 54771302 54771317 PRDM1 JASPAR yes 118292421
chr1 54771302 54771323 IRF1 JASPAR yes 28971178
chr1 54771302 54771323 IRF1 JASPAR yes 118292422
chr1 54771304 54771325 IRF1 JASPAR yes 28971179
chr1 54771304 54771325 IRF1 JASPAR yes 118292423
chr1 54771306 54771321 PRDM1 JASPAR yes 28971180
chr1 54771306 54771321 PRDM1 JASPAR yes 118292424
chr1 54771308 54771323 PRDM1 JASPAR yes 28971181
chr1 54771308 54771323 PRDM1 JASPAR yes 118292425
Genes associated with rs10888845[chr1:54771308], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More