EnhancerDB
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  3. rs10908838[chr1:154397984]
Enhancers that have rs10908838[chr1:154397984]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 154376585 154406743 enh12276
Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr1 154397743 154397997 vista3376
VISTA
Transcript factors that have rs10908838[chr1:154397984]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 154397588 154398092 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21340439
chr1 154397588 154398092 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107832605
chr1 154397670 154398066 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21340440
chr1 154397670 154398066 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107832606
chr1 154397681 154398011 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21340441
chr1 154397681 154398011 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107832607
chr1 154397699 154398019 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21340442
chr1 154397699 154398019 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107832608
chr1 154397860 154398596 ZNF274 GTRD no Blood (GM12878) 21340444
chr1 154397860 154398596 ZNF274 GTRD no Blood (GM12878) 107832611
chr1 154397957 154398353 ZNF274 GTRD no Bone Marrow (K562) 107832612
chr1 154397972 154397990 ESR2 JASPAR yes 32291343
chr1 154397972 154397990 ESR2 JASPAR yes 118372967
Genes associated with rs10908838[chr1:154397984], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More