EnhancerDB
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  3. rs10912613[chr1:173370403]
Enhancers that have rs10912613[chr1:173370403]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 173367664 173402717 enh734
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Muscle (A673)
Transcript factors that have rs10912613[chr1:173370403]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 173370248 173370517 SOX2 GTRD no Neural Stem Cells (H9) 21351237
chr1 173370263 173370500 SOX2 GTRD no Neural Stem Cells (H9) 21351238
chr1 173370389 173370406 RXRA JASPAR yes 33195179
chr1 173370391 173370405 GATA2 JASPAR yes 33195180
Genes associated with rs10912613[chr1:173370403], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More