EnhancerDB
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  3. rs10912617[chr1:173396746]
Enhancers that have rs10912617[chr1:173396746]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 173367664 173402717 enh734
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Muscle (A673)
Transcript factors that have rs10912617[chr1:173396746]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 173396730 173396751 IRF1 JASPAR yes 33199105
chr1 173396732 173396747 IRF9 JASPAR yes 33199106
chr1 173396733 173396747 IRF7 JASPAR yes 33199107
chr1 173396733 173396747 IRF8 JASPAR yes 33199108
chr1 173396734 173396748 STAT1 JASPAR yes 33199109
chr1 173396734 173396749 STAT2 JASPAR yes 33199110
chr1 173396734 173396752 IRF2 JASPAR yes 33199111
chr1 173396735 173396747 IRF1 JASPAR yes 33199112
chr1 173396746 173396753 JUN TRANSFAC yes 33199113
Genes associated with rs10912617[chr1:173396746], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More