EnhancerDB
  1. Home
  2. SNP
  3. rs10916446[chr1:229339307]
Enhancers that have rs10916446[chr1:229339307]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 229330645 229348935 enh12763
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Ovary Blood (T-cell) Esophagus Brain (SK-N-MC) Stomach Muscle (A673) Placenta Uterus Neural Stem Cells (H9) Thymus Heart
chr1 229339200 229339557 vista5460
VISTA
Transcript factors that have rs10916446[chr1:229339307]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 229339134 229339474 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21390624
chr1 229339134 229339474 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107877825
chr1 229339162 229339682 ATF2 UCSC Txn Factor no Conserved 107877826
chr1 229339162 229339682 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107877827
chr1 229339173 229339629 JUND UCSC Txn Factor no Conserved 107877828
chr1 229339173 229339629 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107877829
chr1 229339193 229339589 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107877830
chr1 229339204 229339592 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107877831
chr1 229339213 229339593 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107877832
chr1 229339225 229339555 CHD2 UCSC Txn Factor no Conserved 107877833
chr1 229339225 229339555 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107877834
chr1 229339231 229339595 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21390625
chr1 229339231 229339595 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107877835
chr1 229339248 229339548 SP1 UCSC Txn Factor no Conserved 107877836
chr1 229339248 229339548 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107877837
chr1 229339254 229339544 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21390626
chr1 229339254 229339544 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107877838
chr1 229339258 229339518 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21390627
chr1 229339258 229339518 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107877839
chr1 229339261 229339581 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107877840
chr1 229339270 229339510 SP2 UCSC Txn Factor no Conserved 107877841
chr1 229339270 229339510 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107877842
chr1 229339270 229339528 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107877843
chr1 229339279 229340132 ZNF143 GTRD no Epithelial (MCF-7) 21390628
chr1 229339279 229340132 ZNF143 GTRD no Epithelial (MCF-7) 107877844
chr1 229339280 229339550 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107877845
chr1 229339280 229339560 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107877846
chr1 229339283 229339527 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107877847
chr1 229339283 229339527 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107877848
chr1 229339286 229339457 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107877849
chr1 229339292 229339311 CTCF JASPAR yes 35973860
chr1 229339292 229339311 CTCF JASPAR yes 118475868
chr1 229339296 229339311 TFAP2C JASPAR yes 35973862
chr1 229339296 229339311 TFAP2C JASPAR yes 118475870
chr1 229339297 229339503 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107877850
chr1 229339301 229339316 NFYB JASPAR yes 35973863
chr1 229339301 229339316 NFYB JASPAR yes 118475871
chr1 229339303 229339319 NFYA JASPAR yes 35973864
chr1 229339303 229339319 NFYA JASPAR yes 118475872
chr1 229339304 229339322 NFYA JASPAR yes 35973865
chr1 229339304 229339322 NFYA JASPAR yes 118475873
Genes associated with rs10916446[chr1:229339307], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More