EnhancerDB
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  3. rs10980200[chr9:112859077]
Enhancers that have rs10980200[chr9:112859077]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr9 112855365 112885775 enh25898
Brain (SK-N-MC) Astrocyte Uterus Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs10980200[chr9:112859077]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr9 112859058 112859078 RREB1 JASPAR yes 86225353
chr9 112859059 112859079 RREB1 JASPAR yes 86225354
chr9 112859060 112859080 RREB1 JASPAR yes 86225356
chr9 112859061 112859081 RREB1 JASPAR yes 86225357
chr9 112859062 112859082 RREB1 JASPAR yes 86225359
chr9 112859063 112859077 PLAG1 JASPAR yes 86225360
chr9 112859063 112859084 ZNF263 JASPAR yes 86225361
chr9 112859064 112859084 RREB1 JASPAR yes 86225362
chr9 112859065 112859082 RXRA JASPAR yes 86225363
chr9 112859067 112859077 ZNF740 JASPAR yes 86225364
chr9 112859068 112859078 ZNF740 JASPAR yes 86225365
chr9 112859069 112859079 SP1 JASPAR yes 86225366
chr9 112859069 112859079 ZNF740 JASPAR yes 86225367
chr9 112859070 112859080 SP1 JASPAR yes 86225368
chr9 112859070 112859080 ZNF740 JASPAR yes 86225369
chr9 112859071 112859081 ZNF740 JASPAR yes 86225370
Genes associated with rs10980200[chr9:112859077], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More