EnhancerDB
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  3. rs11077999[chr17:80493630]
Enhancers that have rs11077999[chr17:80493630]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 80480565 80515355 enh4649
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs11077999[chr17:80493630]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 80491797 80495137 TCF7L2 GTRD no Colon (HCT116) 21800723
chr17 80491797 80495137 TCF7L2 GTRD no Colon (HCT116) 108312679
chr17 80491845 80495445 TCF7L2 GTRD no Colon (HCT116) 21800724
chr17 80491845 80495445 TCF7L2 GTRD no Colon (HCT116) 108312680
chr17 80493363 80495370 TCF7L2 GTRD no Colon (HCT116) 21800725
chr17 80493363 80495370 TCF7L2 GTRD no Colon (HCT116) 108312681
chr17 80493612 80493632 RREB1 JASPAR yes 56371601
chr17 80493612 80493633 IRF1 JASPAR yes 56371602
chr17 80493613 80493634 IRF1 JASPAR yes 56371604
chr17 80493617 80493631 IRF7 JASPAR yes 56371607
chr17 80493618 80493638 RREB1 JASPAR yes 56371608
chr17 80493618 80493639 IRF1 JASPAR yes 56371609
chr17 80493619 80493634 FOXP1 JASPAR yes 56371611
chr17 80493619 80493640 IRF1 JASPAR yes 56371612
chr17 80493620 80493635 STAT2 JASPAR yes 56371613
chr17 80493623 80493635 IRF1 JASPAR yes 56371614
chr17 80493624 80493645 IRF1 JASPAR yes 56371615
chr17 80493625 80493631 TCF4 TRANSFAC yes 56371616
chr17 80493625 80493640 FOXP1 JASPAR yes 56371617
chr17 80493626 80493637 FOXP2 JASPAR yes 56371618
chr17 80493626 80493638 FOXC2 JASPAR yes 56371619
Genes associated with rs11077999[chr17:80493630], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More