EnhancerDB
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  3. rs111292802[chr12:125234620]
Enhancers that have rs111292802[chr12:125234620]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 125176905 125261395 enh2676
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs111292802[chr12:125234620]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 125234315 125234860 ZNF274 GTRD no Bone Marrow (K562) 21582737
chr12 125234522 125235126 ZNF274 GTRD no Bone Marrow (K562) 21582738
chr12 125234613 125234624 NFKB1 JASPAR yes 124417458
chr12 125234614 125234624 NFKB1 JASPAR yes 124417459
chr12 125234619 125234631 TFAP2A JASPAR yes 124417460
chr12 125234619 125234631 TFAP2B JASPAR yes 124417461
chr12 125234619 125234631 TFAP2C JASPAR yes 124417462
chr12 125234620 125234631 TFAP2A JASPAR yes 124417463
Genes associated with rs111292802[chr12:125234620], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More