EnhancerDB
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  3. rs11134820[chr5:173205431]
Enhancers that have rs11134820[chr5:173205431]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 173178093 173268555 enh8886
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs11134820[chr5:173205431]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 173205419 173205431 PKNOX1 JASPAR yes 67903872
chr5 173205419 173205431 PKNOX2 JASPAR yes 67903873
chr5 173205419 173205431 TGIF1 JASPAR yes 67903874
chr5 173205419 173205431 TGIF2 JASPAR yes 67903875
Genes associated with rs11134820[chr5:173205431], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More