EnhancerDB
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  3. rs111380158[chr1:41852552]
Enhancers that have rs111380158[chr1:41852552]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 41849805 41888800 enh11788
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs111380158[chr1:41852552]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 41852543 41852563 RREB1 JASPAR yes 28383456
chr1 41852544 41852554 SP1 JASPAR yes 28383457
chr1 41852546 41852552 SP1 TRANSFAC yes 28383459
chr1 41852550 41852560 SP1 JASPAR yes 28383460
chr1 41852550 41852564 GLIS2 JASPAR yes 28383461
chr1 41852552 41852562 ZNF740 JASPAR yes 28383462
chr1 41852552 41852572 RREB1 JASPAR yes 28383463
Genes associated with rs111380158[chr1:41852552], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More