EnhancerDB
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  3. rs11149729[chr16:85271446]
Enhancers that have rs11149729[chr16:85271446]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85219145 85290912 enh16864
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs11149729[chr16:85271446]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85270687 85272389 ZNF143 GTRD no Epithelial (MCF-7) 21721800
chr16 85270716 85272888 TCF7L2 GTRD no Colon (HCT116) 21721801
chr16 85270747 85271460 ZNF143 GTRD no Epithelial (MCF-7) 21721802
chr16 85270930 85271537 ZNF274 GTRD no Bone Marrow (K562) 21721803
chr16 85270991 85272052 ZNF274 GTRD no Bone Marrow (K562) 21721804
chr16 85271104 85272153 ZNF274 GTRD no Bone Marrow (K562) 21721806
chr16 85271439 85272309 ZNF143 GTRD no Epithelial (MCF-7) 21721808
chr16 85271445 85271466 IRF1 JASPAR yes 12036999
chr16 85271446 85271461 FOXP1 JASPAR yes 12037000
Genes associated with rs11149729[chr16:85271446], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More