EnhancerDB
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Enhancers that have rs111588890[chr10:95194008]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr10 95190385 95209175 enh13411
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs111588890[chr10:95194008]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr10 95193566 95194042 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21450815
chr10 95193566 95194042 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107931681
chr10 95193624 95194446 ZNF143 GTRD no Epithelial (MCF-7) 21450816
chr10 95193624 95194446 ZNF143 GTRD no Epithelial (MCF-7) 107931683
chr10 95193666 95194404 ZNF143 GTRD no Epithelial (MCF-7) 21450817
chr10 95193666 95194404 ZNF143 GTRD no Epithelial (MCF-7) 107931684
chr10 95193668 95194422 GATA3 GTRD no Thymus 21450818
chr10 95193668 95194422 GATA3 GTRD no Thymus 107931685
chr10 95193692 95194240 ZNF143 GTRD no Epithelial (MCF-7) 21450819
chr10 95193692 95194240 ZNF143 GTRD no Epithelial (MCF-7) 107931686
chr10 95193757 95194398 ZNF143 GTRD no Epithelial (MCF-7) 21450820
chr10 95193757 95194398 ZNF143 GTRD no Epithelial (MCF-7) 107931687
chr10 95193999 95194011 YY1 JASPAR yes 129210557
chr10 95194003 95194014 CEBPB JASPAR yes 129210558
chr10 95194004 95194017 NFKB1 JASPAR yes 129210559
chr10 95194004 95194017 NFKB2 JASPAR yes 129210560
Genes associated with rs111588890[chr10:95194008], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More