EnhancerDB
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  3. rs111639573[chr1:235146768]
Enhancers that have rs111639573[chr1:235146768]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 235130325 235168235 enh997
Bone Marrow (K562) Liver Astrocyte Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Lung Heart
Transcript factors that have rs111639573[chr1:235146768]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 235146383 235149741 POLR2A UCSC Txn Factor no Conserved 107885561
chr1 235146414 235146850 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21402968
chr1 235146419 235146855 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21402969
chr1 235146474 235146804 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21402972
chr1 235146512 235148199 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21402973
chr1 235146512 235148199 RUNX3 UCSC Txn Factor no Conserved 107885562
chr1 235146512 235148199 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107885563
chr1 235146566 235148196 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21402974
chr1 235146566 235148196 NFIC UCSC Txn Factor no Conserved 107885564
chr1 235146566 235148196 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107885565
chr1 235146759 235146775 GLIS1 JASPAR yes 36341923
chr1 235146763 235146769 MZF1 JASPAR yes 36341924
chr1 235146766 235146784 RARA JASPAR yes 36341925
Genes associated with rs111639573[chr1:235146768], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More