EnhancerDB
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  3. rs111668109[chr1:43499218]
Enhancers that have rs111668109[chr1:43499218]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 43495245 43526835 enh11806
Bone Marrow (K562) Skin (Keratinocyte) Liver (HepG2) Brain (SK-N-SH) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Ovary Muscle (A673) Placenta Uterus Muscle (Myoblast) Pancreas Spleen Muscle (Myotube) Neural Stem Cells (H9) Blood (T-cell) Stomach
Transcript factors that have rs111668109[chr1:43499218]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 43499215 43499224 ZEB1 JASPAR yes 28480355
chr1 43499215 43499230 SCRT1 JASPAR yes 28480356
chr1 43499216 43499226 ID4 JASPAR yes 28480357
chr1 43499216 43499226 TCF3 JASPAR yes 28480358
chr1 43499216 43499226 TCF4 JASPAR yes 28480359
chr1 43499217 43499226 SNAI2 JASPAR yes 28480360
chr1 43499218 43499223 USF2 TRANSFAC yes 28480361
Genes associated with rs111668109[chr1:43499218], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More