EnhancerDB
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  3. rs111727426[chr12:52520242]
Enhancers that have rs111727426[chr12:52520242]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 52508085 52522855 enh2356
Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Spleen Liver (HepG2) Muscle (A673) Heart
Transcript factors that have rs111727426[chr12:52520242]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 52519065 52523398 P63 GTRD no Skin (Keratinocyte) 21546231
chr12 52519499 52523414 P63 GTRD no Skin (Keratinocyte) 21546243
chr12 52519705 52520959 ZNF143 GTRD no Epithelial (MCF-7) 21546244
chr12 52519737 52520933 ZNF143 GTRD no Epithelial (MCF-7) 21546245
chr12 52520172 52522261 P63 GTRD no Skin (Keratinocyte) 21546246
chr12 52520234 52520247 SMAD2 JASPAR yes 120919566
Genes associated with rs111727426[chr12:52520242], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More