EnhancerDB
  1. Home
  2. SNP
  3. rs111739542[chr11:12840676]
Enhancers that have rs111739542[chr11:12840676]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 12804154 12848277 enh13788
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs111739542[chr11:12840676]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 12840669 12840684 FOXA1 JASPAR yes 37481903
chr11 12840672 12840683 FOXB1 JASPAR yes 37481904
chr11 12840672 12840683 FOXC1 JASPAR yes 37481905
chr11 12840675 12840689 RORA JASPAR yes 37481906
chr11 12840676 12840686 RORA JASPAR yes 37481907
Genes associated with rs111739542[chr11:12840676], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More