EnhancerDB
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  3. rs111818003[chr16:88847242]
Enhancers that have rs111818003[chr16:88847242]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 88819352 88850435 enh16903
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs111818003[chr16:88847242]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 88847121 88849037 TCF7L2 GTRD no Colon (HCT116) 21737173
chr16 88847121 88849037 TCF7L2 GTRD no Colon (HCT116) 108223690
chr16 88847121 88849037 TCF7L2 GTRD no Colon (HCT116) 108223691
chr16 88847121 88849037 TCF7L2 GTRD no Colon (HCT116) 108223692
chr16 88847171 88848094 TCF7L2 GTRD no Colon (HCT116) 21737174
chr16 88847171 88848094 TCF7L2 GTRD no Colon (HCT116) 108223693
chr16 88847194 88848450 ZNF143 GTRD no Epithelial (MCF-7) 21737175
chr16 88847194 88848450 ZNF143 GTRD no Epithelial (MCF-7) 108223694
chr16 88847194 88848450 ZNF143 GTRD no Epithelial (MCF-7) 108223695
chr16 88847233 88847242 ZEB1 JASPAR yes 12303761
chr16 88847233 88847246 ZBTB18 JASPAR yes 12303762
chr16 88847234 88847244 FIGLA JASPAR yes 12303763
chr16 88847234 88847244 ID4 JASPAR yes 12303764
chr16 88847234 88847244 TCF3 JASPAR yes 12303765
chr16 88847234 88847244 TCF4 JASPAR yes 12303766
chr16 88847235 88847244 SNAI2 JASPAR yes 12303767
Genes associated with rs111818003[chr16:88847242], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More