EnhancerDB
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  3. rs11183478[chr12:46824066]
Enhancers that have rs11183478[chr12:46824066]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 46820955 46858735 enh14676
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs11183478[chr12:46824066]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 46823765 46825133 ZBTB33 GTRD no Brain (SK-N-SH) 108027118
chr12 46823893 46824212 ZNF274 GTRD no Cervix (HeLa-S3) 21541465
chr12 46823893 46824212 ZNF274 GTRD no Cervix (HeLa-S3) 108027119
chr12 46823995 46824360 ZBTB33 GTRD no Brain (SK-N-SH) 108027120
chr12 46824005 46824621 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21541466
chr12 46824005 46824621 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108027121
chr12 46824033 46824665 TCF7L2 UCSC Txn Factor no Conserved 108027122
chr12 46824036 46824600 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21541467
chr12 46824036 46824600 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108027123
chr12 46824046 46824702 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108027124
chr12 46824054 46824066 SRF JASPAR yes 120619098
Genes associated with rs11183478[chr12:46824066], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More