EnhancerDB
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  3. rs111868817[chr12:52516182]
Enhancers that have rs111868817[chr12:52516182]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 52508085 52522855 enh2356
Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Spleen Liver (HepG2) Muscle (A673) Heart
Transcript factors that have rs111868817[chr12:52516182]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 52513207 52519034 P63 GTRD no Skin (Keratinocyte) 21546171
chr12 52515664 52517241 AR GTRD no Prostate (PC-3) 21546199
chr12 52515896 52516492 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21546210
chr12 52515932 52516452 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21546211
chr12 52516021 52516405 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21546212
chr12 52516104 52516218 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21546213
chr12 52516110 52516948 ZNF143 GTRD no Epithelial (MCF-7) 21546214
chr12 52516118 52517536 ZNF143 GTRD no Epithelial (MCF-7) 21546215
chr12 52516120 52516758 ZNF143 GTRD no Epithelial (MCF-7) 21546216
chr12 52516151 52517509 ZNF143 GTRD no Epithelial (MCF-7) 21546217
chr12 52516173 52516749 ZNF274 GTRD no Blood (GM12878) 21546218
chr12 52516179 52516190 NFKB1 JASPAR yes 120919050
chr12 52516180 52516185 ETS2 TRANSFAC yes 120919051
Genes associated with rs111868817[chr12:52516182], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More