EnhancerDB
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  3. rs111877474[chr1:19712966]
Enhancers that have rs111877474[chr1:19712966]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 19711685 19745775 enh98
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Neural Stem Cells (H9) Thymus Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs111877474[chr1:19712966]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 19712965 19712975 HOXA13 JASPAR yes 27183781
chr1 19712965 19712975 HOXB13 JASPAR yes 27183782
chr1 19712965 19712975 HOXD13 JASPAR yes 27183783
chr1 19712966 19712980 GLIS3 JASPAR yes 27183784
Genes associated with rs111877474[chr1:19712966], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More