EnhancerDB
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  3. rs111917557[chr1:203529082]
Enhancers that have rs111917557[chr1:203529082]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 203511661 203530955 enh12558
Skin (Keratinocyte) Prostate (PC-3) Kidney Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Lung (A549) Stomach Muscle (A673) Placenta Adrenal Uterus Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9) Heart
Transcript factors that have rs111917557[chr1:203529082]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 203528072 203529357 ZNF274 GTRD no Cervix (HeLa-S3) 21369544
chr1 203528821 203529362 ZBTB33 GTRD no Lung (A549) 21369551
chr1 203528879 203529235 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21369552
chr1 203528965 203529281 ZBTB33 GTRD no Lung (A549) 21369553
chr1 203529072 203529085 SMAD2 JASPAR yes 34640245
chr1 203529079 203529094 SCRT1 JASPAR yes 34640246
chr1 203529080 203529090 ID4 JASPAR yes 34640247
chr1 203529080 203529090 TCF3 JASPAR yes 34640248
chr1 203529080 203529090 TCF4 JASPAR yes 34640249
chr1 203529081 203529090 SNAI2 JASPAR yes 34640250
chr1 203529082 203529087 USF2 TRANSFAC yes 34640251
Genes associated with rs111917557[chr1:203529082], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More