EnhancerDB
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  3. rs111972339[chr5:77785472]
Enhancers that have rs111972339[chr5:77785472]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 77784972 77817655 enh8511
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs111972339[chr5:77785472]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 77785454 77785472 RARA JASPAR yes 63591683
chr5 77785461 77785482 ZNF263 JASPAR yes 63591685
chr5 77785464 77785478 PLAG1 JASPAR yes 63591687
Genes associated with rs111972339[chr5:77785472], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More