EnhancerDB
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  3. rs11205684[chr1:39612133]
Enhancers that have rs11205684[chr1:39612133]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 39588469 39628695 enh11759
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs11205684[chr1:39612133]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 39612119 39612134 FOXP1 JASPAR yes 28257955
chr1 39612120 39612135 FOXP1 JASPAR yes 28257956
chr1 39612120 39612141 IRF1 JASPAR yes 28257957
chr1 39612121 39612136 FOXP1 JASPAR yes 28257958
chr1 39612121 39612142 IRF1 JASPAR yes 28257959
chr1 39612122 39612137 FOXP1 JASPAR yes 28257960
chr1 39612124 39612139 FOXP1 JASPAR yes 28257961
chr1 39612125 39612146 IRF1 JASPAR yes 28257962
chr1 39612126 39612141 FOXP1 JASPAR yes 28257963
chr1 39612129 39612143 SPIC JASPAR yes 28257964
chr1 39612129 39612143 STAT1 JASPAR yes 28257965
chr1 39612129 39612144 PRDM1 JASPAR yes 28257966
chr1 39612129 39612144 STAT2 JASPAR yes 28257967
chr1 39612129 39612150 IRF1 JASPAR yes 28257968
chr1 39612131 39612152 IRF1 JASPAR yes 28257969
chr1 39612133 39612154 IRF1 JASPAR yes 28257970
Genes associated with rs11205684[chr1:39612133], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More