EnhancerDB
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  3. rs11205860[chr1:52036639]
Enhancers that have rs11205860[chr1:52036639]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 52027839 52037840 enh360
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Prostate (RWPE1) Heart
Transcript factors that have rs11205860[chr1:52036639]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 52036635 52036646 E2F4 JASPAR yes 28852196
chr1 52036635 52036646 E2F6 JASPAR yes 28852197
chr1 52036635 52036649 E2F7 JASPAR yes 28852198
chr1 52036636 52036647 E2F1 JASPAR yes 28852199
Genes associated with rs11205860[chr1:52036639], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More