EnhancerDB
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  3. rs112060052[chr5:77786442]
Enhancers that have rs112060052[chr5:77786442]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 77784972 77817655 enh8511
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs112060052[chr5:77786442]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 77786439 77786448 ZEB1 JASPAR yes 63591833
chr5 77786439 77786454 SCRT1 JASPAR yes 63591834
chr5 77786440 77786450 FIGLA JASPAR yes 63591835
chr5 77786440 77786450 ID4 JASPAR yes 63591836
chr5 77786440 77786450 TCF3 JASPAR yes 63591837
chr5 77786440 77786450 TCF4 JASPAR yes 63591838
chr5 77786441 77786450 SNAI2 JASPAR yes 63591839
chr5 77786442 77786447 USF2 TRANSFAC yes 63591840
Genes associated with rs112060052[chr5:77786442], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More