EnhancerDB
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  3. rs112187779[chr3:58055205]
Enhancers that have rs112187779[chr3:58055205]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 58016005 58062055 enh20647
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs112187779[chr3:58055205]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 58055194 58055211 RARA JASPAR yes 2672359
chr3 58055203 58055221 ESR2 JASPAR yes 2672360
chr3 58055205 58055209 H4TF2 TRANSFAC yes 2672361
Genes associated with rs112187779[chr3:58055205], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More