EnhancerDB
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  3. rs112212940[chr12:52516570]
Enhancers that have rs112212940[chr12:52516570]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 52508085 52522855 enh2356
Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Spleen Liver (HepG2) Muscle (A673) Heart
Transcript factors that have rs112212940[chr12:52516570]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 52513207 52519034 P63 GTRD no Skin (Keratinocyte) 21546171
chr12 52515664 52517241 AR GTRD no Prostate (PC-3) 21546199
chr12 52516110 52516948 ZNF143 GTRD no Epithelial (MCF-7) 21546214
chr12 52516118 52517536 ZNF143 GTRD no Epithelial (MCF-7) 21546215
chr12 52516120 52516758 ZNF143 GTRD no Epithelial (MCF-7) 21546216
chr12 52516151 52517509 ZNF143 GTRD no Epithelial (MCF-7) 21546217
chr12 52516173 52516749 ZNF274 GTRD no Blood (GM12878) 21546218
chr12 52516189 52516803 ZNF143 GTRD no Epithelial (MCF-7) 21546219
chr12 52516192 52517561 ZNF143 GTRD no Epithelial (MCF-7) 21546220
chr12 52516217 52516784 ZNF143 GTRD no Epithelial (MCF-7) 21546221
chr12 52516313 52516883 ZNF143 GTRD no Epithelial (MCF-7) 21546222
chr12 52516343 52516798 ZNF143 GTRD no Epithelial (MCF-7) 21546223
chr12 52516377 52516812 ZNF143 GTRD no Epithelial (MCF-7) 21546224
chr12 52516445 52516700 ZNF274 GTRD no Blood (GM12878) 21546225
chr12 52516565 52516575 ZNF740 JASPAR yes 120919086
chr12 52516565 52516579 ZIC1 JASPAR yes 120919087
chr12 52516565 52516580 ZIC3 JASPAR yes 120919088
chr12 52516565 52516580 ZIC4 JASPAR yes 120919089
chr12 52516566 52516576 SP1 JASPAR yes 120919090
chr12 52516566 52516576 ZNF740 JASPAR yes 120919091
chr12 52516567 52516577 ZNF740 JASPAR yes 120919092
chr12 52516568 52516582 EBF1 JASPAR yes 120919093
chr12 52516568 52516582 GLIS2 JASPAR yes 120919094
chr12 52516569 52516580 EBF1 JASPAR yes 120919095
Genes associated with rs112212940[chr12:52516570], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More