EnhancerDB
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  3. rs112222178[chr15:42220913]
Enhancers that have rs112222178[chr15:42220913]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 42202285 42235244 enh3549
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs112222178[chr15:42220913]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 42220743 42221201 TCF7L2 GTRD no Colon (HCT116) 21651278
chr15 42220743 42221201 TCF7L2 GTRD no Colon (HCT116) 108135208
chr15 42220764 42221292 TCF7L2 GTRD no Colon (HCT116) 21651279
chr15 42220764 42221292 TCF7L2 GTRD no Colon (HCT116) 108135209
chr15 42220815 42221428 TCF7L2 GTRD no Colon (HCT116) 21651280
chr15 42220815 42221428 TCF7L2 GTRD no Colon (HCT116) 108135210
chr15 42220826 42221324 TCF7L2 GTRD no Colon (HCT116) 21651281
chr15 42220826 42221324 TCF7L2 GTRD no Colon (HCT116) 108135211
chr15 42220828 42221258 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21651282
chr15 42220828 42221258 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108135212
chr15 42220845 42221215 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21651283
chr15 42220845 42221215 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108135213
chr15 42220899 42220914 TFAP2C JASPAR yes 23006314
chr15 42220908 42221438 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21651284
chr15 42220908 42221438 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108135214
chr15 42220910 42221280 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21651285
chr15 42220910 42221280 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108135215
chr15 42220913 42220918 SP1 TRANSFAC yes 23006315
Genes associated with rs112222178[chr15:42220913], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More