EnhancerDB
  1. Home
  2. SNP
  3. rs112368900[chr17:55993211]
Enhancers that have rs112368900[chr17:55993211]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55982093 56031480 enh4496
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr17 55992933 55993227 vista25265
VISTA
Transcript factors that have rs112368900[chr17:55993211]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55992667 55993458 ZNF143 GTRD no Epithelial (MCF-7) 21773861
chr17 55992667 55993458 ZNF143 GTRD no Epithelial (MCF-7) 108274755
chr17 55992676 55993377 ZNF143 GTRD no Epithelial (MCF-7) 21773862
chr17 55992676 55993377 ZNF143 GTRD no Epithelial (MCF-7) 108274756
chr17 55993208 55993222 GATA2 JASPAR yes 21261260
chr17 55993208 55993222 GATA2 JASPAR yes 54998770
chr17 55993210 55993216 GATA1 TRANSFAC yes 21261261
chr17 55993210 55993216 GATA1 TRANSFAC yes 54998771
Genes associated with rs112368900[chr17:55993211], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More