EnhancerDB
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  3. rs112393357[chr17:55988860]
Enhancers that have rs112393357[chr17:55988860]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55982093 56031480 enh4496
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs112393357[chr17:55988860]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55988845 55988866 IRF1 JASPAR yes 54998163
chr17 55988850 55988871 IRF1 JASPAR yes 54998164
chr17 55988851 55988872 IRF1 JASPAR yes 54998165
chr17 55988852 55988867 FOXP1 JASPAR yes 54998166
chr17 55988852 55988873 IRF1 JASPAR yes 54998167
chr17 55988857 55988872 FOXP1 JASPAR yes 54998168
chr17 55988857 55988872 LEF1 JASPAR yes 54998169
chr17 55988857 55988878 IRF1 JASPAR yes 54998170
chr17 55988858 55988879 IRF1 JASPAR yes 54998171
chr17 55988859 55988874 FOXP1 JASPAR yes 54998172
chr17 55988859 55988880 IRF1 JASPAR yes 54998173
Genes associated with rs112393357[chr17:55988860], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More