EnhancerDB
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  3. rs112430040[chr6:108896329]
Enhancers that have rs112430040[chr6:108896329]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 108896085 108921787 enh23478
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs112430040[chr6:108896329]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 108896312 108896331 RFX2 JASPAR yes 104178940
chr6 108896321 108896333 GRHL1 JASPAR yes 104178941
chr6 108896322 108896332 TFCP2 JASPAR yes 104178942
Genes associated with rs112430040[chr6:108896329], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More