EnhancerDB
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  3. rs112561060[chr5:172434141]
Enhancers that have rs112561060[chr5:172434141]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 172432905 172446573 enh22818
Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs112561060[chr5:172434141]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 172434129 172434141 GRHL1 JASPAR yes 67847172
chr5 172434134 172434142 FOXG1 JASPAR yes 67847173
chr5 172434135 172434145 HOXC10 JASPAR yes 67847174
chr5 172434135 172434145 HOXD11 JASPAR yes 67847175
chr5 172434135 172434146 HOXA10 JASPAR yes 67847176
chr5 172434135 172434146 HOXC11 JASPAR yes 67847177
chr5 172434135 172434146 HOXC12 JASPAR yes 67847178
chr5 172434135 172434146 HOXD12 JASPAR yes 67847179
chr5 172434136 172434145 CDX1 JASPAR yes 67847180
chr5 172434136 172434147 CDX2 JASPAR yes 67847181
Genes associated with rs112561060[chr5:172434141], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More