EnhancerDB
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  3. rs112588971[chr19:2617609]
Enhancers that have rs112588971[chr19:2617609]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 2605719 2641695 enh4960
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs112588971[chr19:2617609]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 2616581 2618471 ZNF274 GTRD no Blood (GM12878) 21837652
chr19 2616581 2618471 ZNF274 GTRD no Blood (GM12878) 108363219
chr19 2616618 2619986 ZNF274 GTRD no Blood (GM12878) 21837655
chr19 2616618 2619986 ZNF274 GTRD no Blood (GM12878) 108363222
chr19 2617069 2617848 TCF7L2 GTRD no Colon (HCT116) 21837674
chr19 2617069 2617848 TCF7L2 GTRD no Colon (HCT116) 108363242
chr19 2617086 2617705 ZNF143 GTRD no Epithelial (MCF-7) 108363243
chr19 2617601 2617611 MZF1 JASPAR yes 112083855
chr19 2617606 2617625 CTCF JASPAR yes 112083857
Genes associated with rs112588971[chr19:2617609], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More