EnhancerDB
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  3. rs112602089[chr1:230248543]
Enhancers that have rs112602089[chr1:230248543]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 230237385 230313644 enh12770
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs112602089[chr1:230248543]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 230248287 230248563 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21391453
chr1 230248287 230248563 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107878669
chr1 230248529 230248549 RREB1 JASPAR yes 36022021
chr1 230248532 230248546 PLAG1 JASPAR yes 36022022
chr1 230248532 230248552 RREB1 JASPAR yes 36022023
chr1 230248540 230248550 SP1 JASPAR yes 36022024
chr1 230248541 230248551 SP1 JASPAR yes 36022025
Genes associated with rs112602089[chr1:230248543], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More